STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_05603Early endosome antigen 1. (1374 aa)    
Predicted Functional Partners:
APPL1
DCC-interacting protein 13-alpha.
      
 0.675
APPL2
DCC-interacting protein 13-beta.
      
 0.675
LAMP1
Lysosome-associated membrane glycoprotein 1.
      
 0.641
AS28_00311
Lysosome-associated membrane glycoprotein 2.
      
 0.635
SNX1
Sorting nexin-1.
      
 0.629
STX6
Syntaxin-6; Belongs to the syntaxin family.
      
 0.621
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.612
TFRC
Transferrin receptor protein 1.
      
 0.591
CAV1
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
      
 0.554
ARF6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.539
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.