ATP5C1 protein (Pygoscelis adeliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ATP5C1

ATP synthase subunit gamma. (275 aa)

Predicted Functional Partners:

ATP5H

0.999

ATP5A1

0.999

ATP5O

0.999

ATP5D

0.999

ATP5F1

0.999

ATP5E

0.996

ATP5J

0.992

ATP5G3

0.986

ATP5G1

0.986

ATP5B

0.985

Your Current Organism:

Pygoscelis adeliae

NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5A1	ATP5B	A0A093NQC5	A0A093NK97	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.988
ATP5A1	ATP5C1	A0A093NQC5	A0A093NZR9	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
ATP5A1	ATP5D	A0A093NQC5	A0A093PDA2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP5A1	ATP5E	A0A093NQC5	A0A093NWD3	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.997
ATP5A1	ATP5F1	A0A093NQC5	A0A093PKL7	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP5A1	ATP5G1	A0A093NQC5	A0A093PB20	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.986
ATP5A1	ATP5G3	A0A093NQC5	A0A093NCF0	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.986
ATP5A1	ATP5H	A0A093NQC5	A0A093NQ48	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP5A1	ATP5J	A0A093NQC5	A0A093P055	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.	0.994
ATP5A1	ATP5O	A0A093NQC5	A0A093P0D3	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
ATP5B	ATP5A1	A0A093NK97	A0A093NQC5	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.988
ATP5B	ATP5C1	A0A093NK97	A0A093NZR9	Uncharacterized protein.	ATP synthase subunit gamma.	0.985
ATP5B	ATP5D	A0A093NK97	A0A093PDA2	Uncharacterized protein.	Uncharacterized protein.	0.969
ATP5B	ATP5E	A0A093NK97	A0A093NWD3	Uncharacterized protein.	Uncharacterized protein.	0.926
ATP5B	ATP5F1	A0A093NK97	A0A093PKL7	Uncharacterized protein.	Uncharacterized protein.	0.977
ATP5B	ATP5G1	A0A093NK97	A0A093PB20	Uncharacterized protein.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.907
ATP5B	ATP5G3	A0A093NK97	A0A093NCF0	Uncharacterized protein.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.907
ATP5B	ATP5H	A0A093NK97	A0A093NQ48	Uncharacterized protein.	Uncharacterized protein.	0.977
ATP5B	ATP5J	A0A093NK97	A0A093P055	Uncharacterized protein.	ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.	0.925
ATP5B	ATP5O	A0A093NK97	A0A093P0D3	Uncharacterized protein.	Uncharacterized protein.	0.975