STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_03117[Protein ADP-ribosylarginine] hydrolase-like 1. (354 aa)    
Predicted Functional Partners:
AS28_03118
Uncharacterized protein.
 
      0.867
UBE2F
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.737
UBXN7
UBX domain-containing protein 7.
     
 0.614
GRTP1
Growth hormone-regulated TBC protein 1.
 
    
 0.593
RBX1
RING-box protein 1.
    
 0.546
RNF7
RING-box protein 2.
    
 0.546
CUL1
Cullin-1; Belongs to the cullin family.
   
 0.545
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
   
 0.545
CUL3
Cullin-3; Belongs to the cullin family.
   
 0.545
UBA3
NEDD8-activating enzyme E1 catalytic subunit.
    
 0.499
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.