STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3CRas-related protein Rab-3C. (221 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK.
    
 0.874
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.705
AS28_11303
Liprin-alpha-2.
   
 
 0.681
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.661
AS28_08251
Synaptotagmin-2.
   
 0.649
SYT1
Synaptotagmin-1.
   
 0.649
RIMBP2
RIMS-binding protein 2.
     
 0.638
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.633
AS28_06343
Rabphilin-3A.
   
 
 0.631
CHM
Rab proteins geranylgeranyltransferase component A 2.
    
 0.615
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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