STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMC1Laminin subunit gamma-1. (203 aa)    
Predicted Functional Partners:
LAMA2
Laminin subunit alpha-2.
 
 
 0.978
ITGA6
Integrin alpha-6; Belongs to the integrin alpha chain family.
   
 0.957
ITGB1
Integrin beta.
   
 0.937
ITGB4
Integrin beta.
   
 0.934
DAG1
Dystroglycan.
   
 0.932
ITGAV
Integrin alpha-V; Belongs to the integrin alpha chain family.
    
 0.930
ITGA9
Integrin alpha-9; Belongs to the integrin alpha chain family.
    
 0.925
ITGA1
Integrin alpha-1; Belongs to the integrin alpha chain family.
   
 0.924
ITGB8
Integrin beta.
    
 0.921
SV2B
Synaptic vesicle glycoprotein 2B.
     
 0.915
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.