SNX4 protein (Pygoscelis adeliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SNX4

Sorting nexin-4. (402 aa)

Predicted Functional Partners:

GAK

0.882

SNX7

0.862

SNX30

0.862

VPS35

0.768

VPS26B

0.715

AS28_13502

0.699

SNX5

0.699

SNX1

0.658

AS28_14935

0.636

AS28_08484

0.636

Your Current Organism:

Pygoscelis adeliae

NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS28_08484	AS28_14935	A0A093RLW1	A0A093NM34	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.907
AS28_08484	SNX1	A0A093RLW1	A0A093NQ94	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-1.	0.818
AS28_08484	SNX30	A0A093RLW1	A0A093RI49	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-30.	0.575
AS28_08484	SNX4	A0A093RLW1	A0A093PAK9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-4.	0.636
AS28_08484	SNX7	A0A093RLW1	A0A093NPU9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-7.	0.575
AS28_08484	VPS26B	A0A093RLW1	A0A093NA81	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 26B.	0.865
AS28_08484	VPS35	A0A093RLW1	A0A093NWN7	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 35.	0.958
AS28_13502	SNX1	A0A093NI48	A0A093NQ94	Sorting nexin-6.	Sorting nexin-1.	0.850
AS28_13502	SNX30	A0A093NI48	A0A093RI49	Sorting nexin-6.	Sorting nexin-30.	0.650
AS28_13502	SNX4	A0A093NI48	A0A093PAK9	Sorting nexin-6.	Sorting nexin-4.	0.699
AS28_13502	SNX7	A0A093NI48	A0A093NPU9	Sorting nexin-6.	Sorting nexin-7.	0.650
AS28_13502	VPS26B	A0A093NI48	A0A093NA81	Sorting nexin-6.	Vacuolar protein sorting-associated protein 26B.	0.461
AS28_13502	VPS35	A0A093NI48	A0A093NWN7	Sorting nexin-6.	Vacuolar protein sorting-associated protein 35.	0.519
AS28_14935	AS28_08484	A0A093NM34	A0A093RLW1	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.907
AS28_14935	SNX1	A0A093NM34	A0A093NQ94	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-1.	0.905
AS28_14935	SNX30	A0A093NM34	A0A093RI49	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-30.	0.575
AS28_14935	SNX4	A0A093NM34	A0A093PAK9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-4.	0.636
AS28_14935	SNX7	A0A093NM34	A0A093NPU9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin-7.	0.575
AS28_14935	VPS26B	A0A093NM34	A0A093NA81	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 26B.	0.942
AS28_14935	VPS35	A0A093NM34	A0A093NWN7	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 35.	0.990