STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_10853Small nuclear ribonucleoprotein-associated protein B. (189 aa)    
Predicted Functional Partners:
AS28_04605
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.995
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.994
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.989
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.988
SF3B4
Splicing factor 3B subunit 4.
    
 0.984
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.983
SF3B3
Splicing factor 3B subunit 3.
   
 0.982
LSM4
U6 snRNA-associated Sm-like LSm4.
   
 0.982
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.981
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.981
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.