STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_04849Serine/threonine-protein kinase SRPK; Belongs to the protein kinase superfamily. (361 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like.
    
   0.630
RBM39
RNA-binding protein 39.
    
 
 0.577
AS28_08435
Serine/arginine-rich splicing factor 4.
   
 
 0.562
SRSF5
Serine/arginine-rich splicing factor 5.
   
 
 0.562
SRSF4
Serine/arginine-rich splicing factor 4.
   
 
 0.562
SRSF6
Serine/arginine-rich splicing factor 6.
   
 
 0.562
ZNF318
Zinc finger protein 318.
    
 
 0.497
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
    
 
 0.487
LEMD3
Inner nuclear membrane protein Man1.
    
 
 0.430
RHBDL3
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
   
  
 0.402
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.