STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPTRAF-interacting protein. (413 aa)    
Predicted Functional Partners:
LRR1
Leucine-rich repeat protein 1.
   
  
 0.611
NEIL3
Endonuclease 8-like 3.
   
  
 0.547
AS28_10148
Fanconi anemia group D2 protein.
   
 
 0.515
AS28_08224
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 
 0.495
TATDN3
Putative deoxyribonuclease TATDN3.
      
 0.491
USP37
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.471
AS28_01070
TNF receptor-associated factor 2.
    
 
 0.465
SPRTN
SprT-like domain-containing protein Spartan.
      
 0.463
CDC45
Cell division control protein 45.
   
  
 0.453
UFD1L
Ubiquitin fusion degradation protein 1.
      
 0.422
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.