STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASTE1Protein asteroid 1. (440 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.655
AS28_07169
Werner syndrome ATP-dependent helicase.
     
 0.533
UBXN7
UBX domain-containing protein 7.
   
 
 0.510
TAF1B
TATA box-binding protein-associated factor RNA polymerase I subunit B.
      
 0.493
TUBGCP2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.493
AS28_01680
Protein FAM161A.
    
 
 0.490
DDX20
Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.476
AS28_04605
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.475
AS28_11089
BTB/POZ domain-containing protein KCTD19.
   
 0.442
NDUFA8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.
   
 
 0.431
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.