Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX3 | VSX1 | A0A093NF54 | A0A093PJD9 | Homeobox protein aristaless-like 3. | Visual system homeobox 1. | 0.485 |
AS28_02242 | VSX1 | A0A093R9N2 | A0A093PJD9 | Secretagogin. | Visual system homeobox 1. | 0.491 |
ATOH7 | FOXN4 | A0A093NVZ2 | A0A093QV34 | Protein atonal 7. | Forkhead box protein N4. | 0.427 |
ATOH7 | VSX1 | A0A093NVZ2 | A0A093PJD9 | Protein atonal 7. | Visual system homeobox 1. | 0.546 |
FOXN4 | ATOH7 | A0A093QV34 | A0A093NVZ2 | Forkhead box protein N4. | Protein atonal 7. | 0.427 |
FOXN4 | VSX1 | A0A093QV34 | A0A093PJD9 | Forkhead box protein N4. | Visual system homeobox 1. | 0.545 |
NXNL1 | VSX1 | A0A093P816 | A0A093PJD9 | Nucleoredoxin-like 1. | Visual system homeobox 1. | 0.452 |
VSX1 | ALX3 | A0A093PJD9 | A0A093NF54 | Visual system homeobox 1. | Homeobox protein aristaless-like 3. | 0.485 |
VSX1 | AS28_02242 | A0A093PJD9 | A0A093R9N2 | Visual system homeobox 1. | Secretagogin. | 0.491 |
VSX1 | ATOH7 | A0A093PJD9 | A0A093NVZ2 | Visual system homeobox 1. | Protein atonal 7. | 0.546 |
VSX1 | FOXN4 | A0A093PJD9 | A0A093QV34 | Visual system homeobox 1. | Forkhead box protein N4. | 0.545 |
VSX1 | NXNL1 | A0A093PJD9 | A0A093P816 | Visual system homeobox 1. | Nucleoredoxin-like 1. | 0.452 |