STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2H5General transcription factor IIH subunit 5. (59 aa)    
Predicted Functional Partners:
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.992
GTF2H1
General transcription factor IIH subunit 1.
    
 0.981
GTF2H3
General transcription factor IIH subunit 3.
    
 0.979
GTF2H2
General transcription factor IIH subunit 2.
    
 0.962
CCNH
Cyclin-H; Belongs to the cyclin family.
    
 0.957
CDK7
Cyclin-dependent kinase 7.
    
 0.954
MNAT1
CDK-activating kinase assembly factor MAT1.
    
 0.912
XPA
DNA repair protein complementing XP-A cells.
    
 0.872
AS28_03911
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.835
GTF2E2
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.834
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.