STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_04152FRAS1-related extracellular matrix protein 1. (89 aa)    
Predicted Functional Partners:
SLC35F1
Solute carrier family 35 member F1.
      
 0.675
HUS1
Checkpoint protein HUS1.
      
 0.675
AS28_11560
Type I inositol 3,4-bisphosphate 4-phosphatase.
      
 0.649
AS28_05573
Ankyrin repeat and sterile alpha motif domain-containing protein 1B.
   
  0.636
ANKS1B
Ankyrin repeat and sterile alpha motif domain-containing protein 1B.
   
  0.636
ANKS1A
Ankyrin repeat and SAM domain-containing protein 1A.
   
  0.636
LEO1
RNA polymerase-associated protein LEO1.
   
  
 0.505
NOS2
Nitric oxide synthase, inducible.
   
  
 0.496
AS28_11420
Nitric oxide synthase, brain.
   
  
 0.496
MTRR
Methionine synthase reductase.
   
  
 0.496
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.