Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR2 | AS28_07733 | A0A093R9U8 | A0A093R5M7 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Ninein-like. | 0.403 |
ACTR2 | NIN | A0A093R9U8 | A0A093NNE9 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Ninein. | 0.403 |
ACTR2 | WASL | A0A093R9U8 | A0A093PFA3 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Neural Wiskott-Aldrich syndrome protein. | 0.983 |
AS28_07733 | ACTR2 | A0A093R5M7 | A0A093R9U8 | Ninein-like. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.403 |
AS28_07733 | ELP3 | A0A093R5M7 | A0A093NVL3 | Ninein-like. | Elongator complex protein 3. | 0.496 |
AS28_07733 | ELP4 | A0A093R5M7 | A0A093NCN0 | Ninein-like. | Elongator complex protein 4. | 0.501 |
AS28_07733 | NIN | A0A093R5M7 | A0A093NNE9 | Ninein-like. | Ninein. | 0.900 |
AS28_07733 | UNC45B | A0A093R5M7 | A0A093RBZ4 | Ninein-like. | Protein unc-45 B. | 0.436 |
AS28_07733 | WASL | A0A093R5M7 | A0A093PFA3 | Ninein-like. | Neural Wiskott-Aldrich syndrome protein. | 0.699 |
ELP3 | AS28_07733 | A0A093NVL3 | A0A093R5M7 | Elongator complex protein 3. | Ninein-like. | 0.496 |
ELP3 | ELP4 | A0A093NVL3 | A0A093NCN0 | Elongator complex protein 3. | Elongator complex protein 4. | 0.977 |
ELP3 | NIN | A0A093NVL3 | A0A093NNE9 | Elongator complex protein 3. | Ninein. | 0.496 |
ELP4 | AS28_07733 | A0A093NCN0 | A0A093R5M7 | Elongator complex protein 4. | Ninein-like. | 0.501 |
ELP4 | ELP3 | A0A093NCN0 | A0A093NVL3 | Elongator complex protein 4. | Elongator complex protein 3. | 0.977 |
ELP4 | NIN | A0A093NCN0 | A0A093NNE9 | Elongator complex protein 4. | Ninein. | 0.501 |
NIN | ACTR2 | A0A093NNE9 | A0A093R9U8 | Ninein. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.403 |
NIN | AS28_07733 | A0A093NNE9 | A0A093R5M7 | Ninein. | Ninein-like. | 0.900 |
NIN | ELP3 | A0A093NNE9 | A0A093NVL3 | Ninein. | Elongator complex protein 3. | 0.496 |
NIN | ELP4 | A0A093NNE9 | A0A093NCN0 | Ninein. | Elongator complex protein 4. | 0.501 |
NIN | UNC45B | A0A093NNE9 | A0A093RBZ4 | Ninein. | Protein unc-45 B. | 0.436 |
page 1 of 2