STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC5Homeobox protein Hox-C5. (148 aa)    
Predicted Functional Partners:
HOXB6
Homeobox protein Hox-B6.
 
 
 
 0.920
HOXD4
Homeobox protein Hox-D4.
 
 
   0.872
HOXA6
Homeobox protein Hox-A6.
 
 
   0.821
HOXC6
Homeobox protein Hox-C6.
   
   0.802
AS28_00878
Homeobox protein Hox-C4.
   
 
 0.802
HOXA7
Homeobox protein Hox-A7.
 
 
   0.702
HOXB5
Homeobox protein Hox-B5a.
   
   0.551
AS28_08079
Homeobox protein Hox-B4.
   
   0.547
AS28_01213
Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.495
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 0.410
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.