STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_14223tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (480 aa)    
Predicted Functional Partners:
N300_09521
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.998
N300_01324
60S ribosomal protein L30.
   
 0.988
N300_08486
Uncharacterized protein.
  
 0.985
N300_09447
60S ribosomal protein L21.
   
 0.985
N300_00877
60S ribosomal protein L5.
  
 0.984
N300_05048
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.984
N300_03171
60S ribosomal protein L31.
   
 0.983
N300_15219
60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.983
N300_13355
60S ribosomal protein L35a.
  
 0.981
N300_15587
60S ribosomal protein L24.
  
 0.980
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.