STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04452RNA pseudouridylate synthase domain-containing protein 3. (204 aa)    
Predicted Functional Partners:
N300_01050
Mitochondrial assembly of ribosomal large subunit protein 1.
  
 
 0.828
N300_00438
Pseudouridylate synthase 7.
   
 
 0.817
N300_10651
Uncharacterized protein.
   
   0.787
N300_08486
Uncharacterized protein.
  
   0.777
N300_11175
RNA methyltransferase-like 1.
  
 
 0.773
N300_06100
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.771
N300_13040
60S ribosomal protein L26.
   
   0.763
N300_07553
Mitochondrial ribosome-associated GTPase 1.
   
 
 0.750
N300_12276
GTP-binding protein 8.
   
 
 0.744
N300_12149
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.737
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.