STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08622Transcription factor RFX4. (721 aa)    
Predicted Functional Partners:
N300_10353
Serine/threonine-protein kinase Chk2.
   
 0.802
N300_15559
Ankyrin repeat family A protein 2.
    
 0.736
N300_01928
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 
 0.713
N300_05201
Serine/threonine-protein kinase DCLK1.
     
 0.626
N300_05202
Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.
     
 0.626
N300_11943
DNA-binding protein RFX7.
    
 
0.597
N300_07470
TATA-binding protein-associated factor 172.
    
   0.473
N300_08905
MHC class II transactivator.
    
 0.472
N300_08906
MHC class II transactivator.
    
 0.472
N300_12663
Leucine-rich repeat-containing protein 34.
    
  0.465
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.