STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10598Sequestosome-1. (393 aa)    
Predicted Functional Partners:
N300_01948
TNF receptor-associated factor 6.
    
 0.989
N300_14248
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.982
N300_05991
Kelch-like 17.
    
 0.971
N300_03535
Polyubiquitin.
   
 0.959
N300_12856
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
    
 0.947
N300_12612
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.944
N300_10209
Kelch-like 20.
    
 0.941
N300_09174
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.938
N300_03309
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.938
N300_12656
Protein kinase C iota type; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.937
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.