Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
N300_10598Sequestosome-1. (393 aa)    
Predicted Functional Partners:
N300_01948
TNF receptor-associated factor 6.
    
 0.999
N300_06976
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.998
N300_06258
Ubiquitin-40S ribosomal protein S27a.
   
 0.997
N300_08210
Serine/threonine-protein kinase ULK1.
    
 
 0.997
N300_03072
WD repeat and FYVE domain-containing protein 3.
   
 0.996
N300_14248
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.996
N300_12856
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
    
 0.995
N300_03535
Polyubiquitin.
   
 0.994
N300_09174
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.994
N300_03309
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.994
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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