Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
N300_10255Coiled-coil domain-containing protein 62. (266 aa)    
Predicted Functional Partners:
N300_12642
Spermatogenesis-associated protein 16.
      
 0.848
N300_10256
Density-regulated protein; Belongs to the DENR family.
 
    
 0.792
N300_11536
PRKCA-binding protein.
      
 0.769
N300_04278
Tektin-1.
      
 0.700
N300_07244
Huntingtin-interacting protein 1.
 
    
 0.661
N300_10254
Huntingtin-interacting protein 1-related protein.
 
    
 0.660
N300_10140
Arf-GAP domain and FG repeat-containing protein 1.
      
 0.614
N300_09590
Golgi-associated PDZ and coiled-coil motif-containing protein.
      
 0.592
N300_10461
Homeodomain-interacting protein kinase 1.
      
 0.561
N300_06634
Actin-related protein 6; Belongs to the actin family.
      
 0.561
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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