STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08446PHD finger protein 20-like 1. (167 aa)    
Predicted Functional Partners:
N300_13195
Fanconi anemia group M protein.
    
 0.957
N300_05998
GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.802
N300_13668
Centromere protein T.
    
 0.637
N300_13458
Protein lin-9.
    
 0.616
N300_01755
Protein lin-54.
   
 0.611
N300_11702
Mediator of RNA polymerase II transcription subunit 23.
   
  0.579
N300_14183
Meiosis-specific with OB domain-containing protein.
    
 0.577
N300_03475
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.577
N300_11745
High mobility group protein 20A.
    
 
 0.571
N300_11940
Zinc finger protein 280D.
   
 
 0.571
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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