STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08496Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
N300_12370
BRCA1-associated RING domain protein 1.
    
 0.636
N300_01946
V(D)J recombination-activating protein 2.
   
 0.551
N300_12600
LYR motif-containing protein 4; Belongs to the complex I LYR family.
    
 0.539
N300_05568
CYTB_CTER domain-containing protein.
    
 0.539
N300_09447
60S ribosomal protein L21.
   
   0.536
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
  0.530
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
  0.512
N300_08486
Uncharacterized protein.
   
   0.507
N300_03957
60S ribosomal protein L8.
   
 
 0.486
N300_05386
Ribosomal_L2_C domain-containing protein.
   
 
 0.484
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.