N300_14622 protein (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N300_14622

Microtubule-associated protein 4. (231 aa)

Predicted Functional Partners:

N300_14621

0.899

N300_09138

0.765

N300_13586

0.713

N300_15697

0.713

N300_03959

0.610

N300_02598

0.564

N300_05295

0.551

N300_12607

0.551

N300_10765

0.551

N300_15728

0.551

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_02598	N300_14621	A0A091IMG9	A0A091HJS1	NmrA domain-containing protein.	Microtubule-associated protein.	0.564
N300_02598	N300_14622	A0A091IMG9	A0A091HMX7	NmrA domain-containing protein.	Microtubule-associated protein 4.	0.564
N300_03959	N300_09138	A0A091ICG7	A0A091HH53	Peripheral plasma membrane protein CASK.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.519
N300_03959	N300_13586	A0A091ICG7	A0A091IB44	Peripheral plasma membrane protein CASK.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.633
N300_03959	N300_14621	A0A091ICG7	A0A091HJS1	Peripheral plasma membrane protein CASK.	Microtubule-associated protein.	0.610
N300_03959	N300_14622	A0A091ICG7	A0A091HMX7	Peripheral plasma membrane protein CASK.	Microtubule-associated protein 4.	0.610
N300_03959	N300_15697	A0A091ICG7	A0A091IWP3	Peripheral plasma membrane protein CASK.	Opioid growth factor receptor.	0.633
N300_05295	N300_14621	A0A091HNH1	A0A091HJS1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule-associated protein.	0.551
N300_05295	N300_14622	A0A091HNH1	A0A091HMX7	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule-associated protein 4.	0.551
N300_05295	N300_15728	A0A091HNH1	A0A091I762	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.670
N300_09138	N300_03959	A0A091HH53	A0A091ICG7	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Peripheral plasma membrane protein CASK.	0.519
N300_09138	N300_14621	A0A091HH53	A0A091HJS1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Microtubule-associated protein.	0.765
N300_09138	N300_14622	A0A091HH53	A0A091HMX7	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Microtubule-associated protein 4.	0.765
N300_10765	N300_14621	A0A091I439	A0A091HJS1	Tubulin epsilon chain; Belongs to the tubulin family.	Microtubule-associated protein.	0.551
N300_10765	N300_14622	A0A091I439	A0A091HMX7	Tubulin epsilon chain; Belongs to the tubulin family.	Microtubule-associated protein 4.	0.551
N300_12607	N300_14621	A0A091HUH3	A0A091HJS1	Tubulin beta-2 chain.	Microtubule-associated protein.	0.551
N300_12607	N300_14622	A0A091HUH3	A0A091HMX7	Tubulin beta-2 chain.	Microtubule-associated protein 4.	0.551
N300_13586	N300_03959	A0A091IB44	A0A091ICG7	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Peripheral plasma membrane protein CASK.	0.633
N300_13586	N300_14621	A0A091IB44	A0A091HJS1	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Microtubule-associated protein.	0.713
N300_13586	N300_14622	A0A091IB44	A0A091HMX7	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Microtubule-associated protein 4.	0.713