STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_13290Protein FAM162A. (137 aa)    
Predicted Functional Partners:
N300_03651
E3 ubiquitin-protein ligase DTX3L.
   
 
 0.808
N300_11295
Uncharacterized protein.
  
 0.514
N300_09930
Histone deacetylase 11.
   
 0.509
N300_15441
Histone deacetylase 1.
   
  0.464
N300_10761
Histone deacetylase 2.
   
  0.464
N300_15936
Histone deacetylase 3.
   
  0.464
N300_00385
Histone deacetylase 10.
   
  0.445
N300_02831
Histone deacetylase 4.
   
  0.445
N300_01028
Histone deacetylase 9.
   
  0.445
N300_10103
Interferon-induced helicase C domain-containing protein 1.
   
 
 0.443
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.