STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10919Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (565 aa)    
Predicted Functional Partners:
N300_04415
Rabenosyn-5.
    
 0.995
N300_04614
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.943
N300_10219
Syntaxin-6; Belongs to the syntaxin family.
    
 
 0.940
N300_12446
GIDA_assoc domain-containing protein.
 
      0.900
N300_03317
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
 
      0.900
N300_01975
Vesicle transport through interaction with t-SNAREs 1B.
   
 
 0.894
N300_14825
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.872
N300_08847
Vacuolar protein sorting-associated protein 18.
    
 0.864
N300_06159
Ras-related protein Rab-5C.
 
  
 0.858
N300_07573
Ras-related protein Rab-5A.
 
  
 0.858
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.