STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_12392Collagen alpha-2(VI) chain. (1022 aa)    
Predicted Functional Partners:
N300_12391
Collagen alpha-1(VI) chain.
  
0.993
N300_05489
Integrin alpha-1; Belongs to the integrin alpha chain family.
   
 0.891
N300_03638
Integrin beta.
    
 0.863
N300_04552
Integrin alpha-6; Belongs to the integrin alpha chain family.
   
 0.862
N300_06205
Integrin beta.
    
 0.857
N300_10094
Integrin beta.
    
 0.854
N300_13628
Integrin beta.
    
 0.851
N300_05567
Integrin alpha-11; Belongs to the integrin alpha chain family.
   
 0.851
N300_01035
Integrin beta.
    
 0.849
N300_06673
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 0.849
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.