STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04172Ufm1-specific protease 2. (460 aa)    
Predicted Functional Partners:
N300_14686
Protein odr-4.
   
 
 0.691
N300_14896
DDRGK domain-containing protein 1.
    
 
 0.594
N300_07845
E3 UFM1-protein ligase 1.
   
  
 0.567
N300_11568
Small G protein signaling modulator 3.
      
 0.481
N300_11954
Activating signal cointegrator 1.
      
 0.481
N300_15466
Zinc finger MYM-type protein 4.
      
 0.477
N300_00389
TraB domain-containing protein.
 
      0.444
N300_05194
Exosome complex component RRP43.
 
      0.427
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.