STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_13728Protein kish; Involved in the early part of the secretory pathway. (37 aa)    
Predicted Functional Partners:
N300_07497
Ribonuclease P protein subunit p30.
   
 
 0.835
N300_14527
Ribonuclease P protein subunit p25-like.
   
 
 0.776
N300_14341
Ribonuclease P protein subunit p25.
   
 
 0.776
N300_12693
Hydroxysteroid dehydrogenase-like 2.
    
  0.668
N300_07961
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.536
N300_09595
Protein FAM162B.
      
 0.535
N300_00682
Immediate early response 3-interacting protein 1.
   
   0.520
N300_11579
Immediate early response 3-interacting protein 1.
   
   0.520
N300_11143
Ubiquitin carboxyl-terminal hydrolase 32.
      
 0.513
N300_00572
Golgin subfamily A member 5.
      
 0.489
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.