N300_06651 protein (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N300_06651

Uncharacterized protein. (124 aa)

Predicted Functional Partners:

N300_07997

0.954

N300_00726

0.952

N300_03079

0.947

N300_05907

0.943

N300_08486

0.941

N300_03187

0.939

N300_08182

0.937

N300_10554

0.933

N300_03242

0.930

N300_13888

0.930

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00726	N300_03079	A0A091I926	A0A091J3A5	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.927
N300_00726	N300_03187	A0A091I926	A0A091I9X5	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.971
N300_00726	N300_03242	A0A091I926	A0A091HLK2	Uncharacterized protein.	Uncharacterized protein.	0.988
N300_00726	N300_05907	A0A091I926	A0A091IIA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
N300_00726	N300_06651	A0A091I926	A0A091HUG1	Uncharacterized protein.	Uncharacterized protein.	0.952
N300_00726	N300_07997	A0A091I926	A0A091IZS7	Uncharacterized protein.	Uncharacterized protein.	0.987
N300_00726	N300_08182	A0A091I926	A0A091J7M7	Uncharacterized protein.	Uncharacterized protein.	0.990
N300_00726	N300_08486	A0A091I926	A0A091HLV8	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_10554	A0A091I926	A0A091HJ92	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.995
N300_00726	N300_13888	A0A091I926	A0A091IFJ6	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.993
N300_03079	N300_00726	A0A091J3A5	A0A091I926	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.927
N300_03079	N300_03187	A0A091J3A5	A0A091I9X5	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L30 domain-containing protein.	0.919
N300_03079	N300_03242	A0A091J3A5	A0A091HLK2	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.925
N300_03079	N300_05907	A0A091J3A5	A0A091IIA6	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.985
N300_03079	N300_06651	A0A091J3A5	A0A091HUG1	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.947
N300_03079	N300_07997	A0A091J3A5	A0A091IZS7	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.904
N300_03079	N300_08182	A0A091J3A5	A0A091J7M7	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.901
N300_03079	N300_08486	A0A091J3A5	A0A091HLV8	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.963
N300_03079	N300_10554	A0A091J3A5	A0A091HJ92	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.929
N300_03079	N300_13888	A0A091J3A5	A0A091IFJ6	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L16 domain-containing protein.	0.945