STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_03373Protein LSM14 A. (454 aa)    
Predicted Functional Partners:
N300_01403
Putative ATP-dependent RNA helicase DDX6.
   
 
 0.954
N300_07702
KIF1-binding protein.
   
 
 0.889
N300_08307
M7GpppN-mRNA hydrolase.
    
 
 0.888
N300_14349
Enhancer of mRNA-decapping protein 3.
    
 
 0.857
N300_13919
mRNA-decapping enzyme 1B.
    
 
 0.770
N300_10030
mRNA-decapping enzyme 1A.
    
 
 0.770
N300_03893
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.762
N300_14646
NAD(P)H-hydrate epimerase.
    
 
 0.688
N300_03988
Protein PAT1 2.
   
 
 0.684
N300_13360
Nucleolin.
    
 
 0.655
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.