STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_06246E3 ubiquitin-protein ligase FANCL. (332 aa)    
Predicted Functional Partners:
N300_13195
Fanconi anemia group M protein.
    
 0.999
N300_09143
Fanconi anemia group A protein.
    
 0.998
N300_12320
Fanconi anemia group C protein.
    
 0.998
N300_02363
Fanconi anemia group B protein.
    
 0.998
N300_14516
Fanconi anemia group G protein.
   
 0.998
N300_06608
Fanconi anemia group F protein.
    
 0.998
N300_03690
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.993
N300_13768
Fanconi anemia group I protein.
    
 0.992
N300_12960
Glutamine-rich protein 2.
    
 0.987
N300_05056
Fanconi anemia-associated protein of 100 kDa.
    
 0.983
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.