STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04159General transcription factor IIE subunit 1. (418 aa)    
Predicted Functional Partners:
N300_02075
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.981
N300_06503
General transcription factor IIH subunit 1.
   
 0.966
N300_03599
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.965
N300_00855
Transcription initiation factor IIB.
    
 0.964
N300_11494
TATA-box-binding protein.
   
 0.964
N300_11896
General transcription factor IIF subunit 2.
   
 0.963
N300_06315
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.961
N300_03888
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.960
N300_12754
General transcription factor IIH subunit.
   
 0.959
N300_11534
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.957
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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