STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04164Protocadherin Fat 1. (4517 aa)    
Predicted Functional Partners:
N300_10912
LIX1-like.
   
 0.845
N300_05122
Casein kinase I isoform delta.
    
  0.711
N300_11542
Casein kinase I isoform epsilon.
    
  0.711
N300_12238
FERM domain-containing protein 6.
    
 0.702
N300_10165
FERM domain-containing protein 6.
    
 0.702
N300_14964
Protocadherin-23.
   
0.610
N300_03353
Neural-cadherin; Cadherins are calcium-dependent cell adhesion proteins.
   
0.589
N300_03397
Cadherin-11; Cadherins are calcium-dependent cell adhesion proteins.
   
0.589
N300_07716
Cadherin-23.
   
0.589
N300_12998
Cadherin-related family member 2.
   
0.589
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.