STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_06440OTU domain-containing protein 1. (197 aa)    
Predicted Functional Partners:
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
 0.824
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
  0.763
N300_03535
Polyubiquitin.
    
 0.676
N300_10229
Polyubiquitin-C.
    
 0.668
N300_10019
2'-5'-oligoadenylate synthase-like 2.
    
 0.668
N300_12612
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.631
N300_09234
Ubiquilin-1.
    
 0.591
N300_10927
Ubiquilin-4.
    
 0.591
N300_09867
Ubiquitin-like 7.
    
 0.591
N300_07651
UV excision repair protein RAD23 B.
    
 0.585
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.