STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_05061BAH and coiled-coil domain-containing protein 1. (124 aa)    
Predicted Functional Partners:
N300_00843
B-cell lymphoma/leukemia 10.
   
 0.936
N300_00625
FRAS1-related extracellular matrix protein 1.
    
 0.851
N300_06599
Leucine-rich repeat-containing G-protein coupled receptor 4.
  
 0.733
N300_14987
Relaxin receptor 1.
  
 0.733
N300_14744
Leucine-rich repeat-containing G-protein coupled receptor 5.
  
 0.733
N300_09896
Relaxin receptor 1.
  
 0.733
N300_03954
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
     
 0.629
N300_05060
BAH and coiled-coil domain-containing protein 1.
 
  
   0.614
N300_11846
Mediator of RNA polymerase II transcription subunit 12-like.
   
 
 0.588
N300_07882
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
  0.571
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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