STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_13384PHD finger protein 13. (294 aa)    
Predicted Functional Partners:
N300_05762
Testis-expressed sequence 30 protein.
    
 0.749
N300_05450
Uncharacterized protein.
    
 0.749
N300_05451
KAT8 regulatory NSL complex subunit 3.
    
 0.749
N300_09509
KAT8 regulatory NSL complex subunit 2.
    
 0.746
N300_09510
KAT8 regulatory NSL complex subunit 2.
    
 0.746
N300_08614
PR domain zinc finger protein 4.
    
 0.731
N300_14074
PR domain zinc finger protein 5.
    
 0.731
N300_10905
Histone-lysine N-methyltransferase SETDB1.
    
 0.723
N300_10244
N-lysine methyltransferase SETD8.
    
 0.720
N300_13645
Histone-lysine N-methyltransferase SETD2.
   
 0.705
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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