STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07387Ribosome biogenesis protein BRX1. (297 aa)    
Predicted Functional Partners:
N300_00809
Putative rRNA-processing protein EBP2.
   
 
 0.999
N300_03617
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.999
N300_09124
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.998
N300_12097
Ribosomal RNA processing protein 1 B.
   
 
 0.998
N300_13610
Nucleolar GTP-binding protein 1.
   
 
 0.998
N300_08926
Ribosomal L1 domain-containing protein 1.
   
 
 0.997
N300_00832
Ribosome production factor 1.
   
 
 0.997
N300_05992
Nucleolar complex protein 2.
   
 
 0.997
N300_08339
Ribosome biogenesis protein bop1.
   
 
 0.996
N300_06013
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.996
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.