Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N300_00901 | N300_01128 | A0A091IG05 | A0A091IQX7 | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | Cytochrome b5 reductase 4. | 0.973 |
N300_00901 | N300_04903 | A0A091IG05 | A0A091HZL7 | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | Uncharacterized protein. | 0.892 |
N300_00901 | N300_05479 | A0A091IG05 | A0A091I0V4 | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1. | 0.477 |
N300_00901 | N300_09114 | A0A091IG05 | A0A091I751 | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.481 |
N300_00990 | N300_01128 | A0A091HYS3 | A0A091IQX7 | Asparagine synthetase [glutamine-hydrolyzing]. | Cytochrome b5 reductase 4. | 0.671 |
N300_00990 | N300_01266 | A0A091HYS3 | A0A091IJC8 | Asparagine synthetase [glutamine-hydrolyzing]. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.751 |
N300_00990 | N300_04903 | A0A091HYS3 | A0A091HZL7 | Asparagine synthetase [glutamine-hydrolyzing]. | Uncharacterized protein. | 0.879 |
N300_00990 | N300_05479 | A0A091HYS3 | A0A091I0V4 | Asparagine synthetase [glutamine-hydrolyzing]. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1. | 0.933 |
N300_00990 | N300_09883 | A0A091HYS3 | A0A091IGD3 | Asparagine synthetase [glutamine-hydrolyzing]. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.751 |
N300_00990 | N300_10407 | A0A091HYS3 | A0A091I564 | Asparagine synthetase [glutamine-hydrolyzing]. | Delta-1-pyrroline-5-carboxylate synthase. | 0.934 |
N300_00990 | N300_12430 | A0A091HYS3 | A0A091IHB3 | Asparagine synthetase [glutamine-hydrolyzing]. | ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.899 |
N300_01128 | N300_00901 | A0A091IQX7 | A0A091IG05 | Cytochrome b5 reductase 4. | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | 0.973 |
N300_01128 | N300_00990 | A0A091IQX7 | A0A091HYS3 | Cytochrome b5 reductase 4. | Asparagine synthetase [glutamine-hydrolyzing]. | 0.671 |
N300_01128 | N300_01266 | A0A091IQX7 | A0A091IJC8 | Cytochrome b5 reductase 4. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.817 |
N300_01128 | N300_04903 | A0A091IQX7 | A0A091HZL7 | Cytochrome b5 reductase 4. | Uncharacterized protein. | 0.904 |
N300_01128 | N300_05479 | A0A091IQX7 | A0A091I0V4 | Cytochrome b5 reductase 4. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1. | 0.563 |
N300_01128 | N300_09114 | A0A091IQX7 | A0A091I751 | Cytochrome b5 reductase 4. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.973 |
N300_01128 | N300_09883 | A0A091IQX7 | A0A091IGD3 | Cytochrome b5 reductase 4. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.817 |
N300_01128 | N300_10407 | A0A091IQX7 | A0A091I564 | Cytochrome b5 reductase 4. | Delta-1-pyrroline-5-carboxylate synthase. | 0.810 |
N300_01128 | N300_12430 | A0A091IQX7 | A0A091IHB3 | Cytochrome b5 reductase 4. | ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.763 |
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