STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08730E3 ubiquitin-protein ligase MARCH2. (247 aa)    
Predicted Functional Partners:
N300_14740
CCR4-NOT transcription complex subunit 2.
    
 
 0.660
N300_06289
F-box only protein 28.
   
    0.656
N300_14818
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.602
N300_14059
Spermatogenesis-associated protein 5.
    
 
 0.602
N300_13901
FAS-associated factor 1.
    
 
 0.589
N300_12996
FAS-associated factor 2.
    
 
 0.589
N300_05920
Protein FAM132A.
    
 
 0.523
N300_05919
Ubiquitin-conjugating enzyme E2 J2.
    
 
 0.523
N300_04403
Von Hippel-Lindau disease tumor suppressor.
   
 
  0.498
N300_14262
Uncharacterized protein.
    
 
 0.492
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.