STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_05006E3 ubiquitin-protein ligase SMURF2. (742 aa)    
Predicted Functional Partners:
N300_05580
Mothers against decapentaplegic 6.
    
 0.982
N300_15279
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.981
N300_08509
Mothers against decapentaplegic 7.
    
 0.975
N300_10406
Mothers against decapentaplegic 7.
    
 0.975
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
 0.967
N300_03535
Polyubiquitin.
    
 0.952
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
 0.947
N300_12321
Protein patched 1.
    
 0.923
N300_03053
Mothers against decapentaplegic homolog.
    
 0.914
N300_07601
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.912
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.