STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04995Rhomboid-related protein 3; Belongs to the peptidase S54 family. (361 aa)    
Predicted Functional Partners:
N300_03959
Peripheral plasma membrane protein CASK.
   
 0.955
N300_04565
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.853
N300_06447
Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.853
N300_14485
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.853
N300_10466
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
  
 0.847
N300_14006
WD repeat-containing protein 90.
   
 
 0.833
N300_00531
Leucine-rich repeat and guanylate kinase domain-containing protein.
  
 0.803
N300_14337
Ryanodine receptor 2.
    
 0.753
N300_14128
Prohibitin.
  
 0.712
N300_06475
Troponin I, fast skeletal muscle.
   
 0.710
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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