STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_02726Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family. (252 aa)    
Predicted Functional Partners:
N300_02426
Protein FADD.
    
 0.944
N300_04746
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 
0.899
N300_14810
Lumican.
    
 0.892
N300_14824
Forkhead box protein O1.
    
 0.873
N300_06702
Caspase-8; Belongs to the peptidase C14A family.
   
 0.871
N300_06703
Caspase-10; Belongs to the peptidase C14A family.
   
 0.871
N300_09494
Tumor necrosis factor receptor superfamily member 10B.
    
 0.841
N300_00625
FRAS1-related extracellular matrix protein 1.
    
 0.800
N300_11603
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
     
 0.780
N300_12646
Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family.
     
 0.750
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.