STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_06673Integrin alpha-V; Belongs to the integrin alpha chain family. (945 aa)    
Predicted Functional Partners:
N300_06205
Integrin beta.
   
 0.995
N300_10094
Integrin beta.
   
 0.994
N300_01035
Integrin beta.
    
 0.993
N300_12374
Fibronectin.
    
 0.990
N300_03638
Integrin beta.
   
 0.976
N300_13628
Integrin beta.
   
 0.960
N300_12385
Integrin beta.
   
 0.943
N300_03086
Osteopontin.
   
 0.930
N300_03486
Vitronectin.
    
 0.928
N300_10052
Filamin-B.
   
 0.926
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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