STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_15098Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)    
Predicted Functional Partners:
N300_05288
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.999
N300_06624
Nuclear pore complex protein Nup205.
 
 
 0.999
N300_10691
Nuclear pore complex protein Nup160.
   
 0.999
N300_09667
Nucleoporin Nup43.
   
 0.999
N300_04405
Protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.999
N300_11477
Nuclear pore complex protein Nup133.
   
 0.999
N300_11614
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.999
N300_07411
Nuclear pore complex protein Nup155.
   
 0.999
N300_02584
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
N300_09314
Nuclear pore complex protein Nup214.
   
 0.998
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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