STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07130Alpha-methylacyl-CoA racemase. (300 aa)    
Predicted Functional Partners:
N300_12693
Hydroxysteroid dehydrogenase-like 2.
  
 0.923
N300_04478
Peroxisomal acyl-coenzyme A oxidase 2.
  
 
 0.912
N300_01088
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 
 0.902
N300_12811
Peroxisomal acyl-coenzyme A oxidase 1.
  
 
 0.842
N300_04017
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.821
N300_09664
Iodotyrosine dehalogenase 1.
  
 
 0.813
N300_06026
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.807
N300_10448
Bifunctional epoxide hydrolase 2.
  
 
 0.805
N300_01855
CoA_binding domain-containing protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
   
  0.804
N300_09219
Riboflavin kinase.
  
 
  0.796
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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