STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_09562Histidine triad nucleotide-binding protein 3. (129 aa)    
Predicted Functional Partners:
N300_15341
TATA box-binding protein-associated factor RNA polymerase I subunit B.
    
 0.737
N300_01710
TATA box-binding protein-associated factor RNA polymerase I subunit D.
    
 0.722
N300_09560
tRNA (Guanine(10)-N2)-methyltransferase.
 
      0.630
N300_04314
Cyclin-dependent kinase 7.
    
 0.588
N300_09728
TATA box-binding protein-like 1.
   
 0.581
N300_01599
TATA-box-binding protein.
   
 0.581
N300_11494
TATA-box-binding protein.
   
 0.581
N300_03776
Uncharacterized protein.
    
 0.568
N300_15202
Acidic repeat-containing protein.
    
 0.568
N300_08927
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.534
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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