STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_06734E3 ubiquitin-protein ligase HECW2. (1553 aa)    
Predicted Functional Partners:
N300_03535
Polyubiquitin.
    
 0.853
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
 0.843
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
 0.831
N300_03258
Serine/threonine-protein kinase Sgk2; Belongs to the protein kinase superfamily.
    
 0.815
N300_10898
26S proteasome non-ATPase regulatory subunit 4.
    
 0.786
N300_01948
TNF receptor-associated factor 6.
    
 0.742
N300_08509
Mothers against decapentaplegic 7.
    
 0.739
N300_10406
Mothers against decapentaplegic 7.
    
 0.739
N300_05580
Mothers against decapentaplegic 6.
    
 0.739
N300_14433
E3 ubiquitin-protein ligase CBL-B.
    
 0.738
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.