STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08816Surfeit locus protein 6. (354 aa)    
Predicted Functional Partners:
N300_00809
Putative rRNA-processing protein EBP2.
   
 
 0.956
N300_12097
Ribosomal RNA processing protein 1 B.
   
 
 0.950
N300_11706
Protein MAK16.
   
   0.947
N300_03617
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.942
N300_00832
Ribosome production factor 1.
   
 
 0.939
N300_13610
Nucleolar GTP-binding protein 1.
   
 
 0.938
N300_07387
Ribosome biogenesis protein BRX1.
   
 
 0.934
N300_11455
RRP15-like.
   
 
 0.926
N300_11951
Putative ribosome biogenesis protein RLP24.
   
 
 0.909
N300_14367
Pescadillo.
   
 
 0.908
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.