STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07716Cadherin-23. (3273 aa)    
Predicted Functional Partners:
N300_10676
Secretin.
   
 0.900
N300_10675
Cadherin-related family member 5.
   
0.900
N300_06147
Junction plakoglobin.
    
 0.741
N300_01502
Catenin beta-1.
    
 0.741
N300_02815
Catenin delta-2.
    
 0.669
N300_12002
Plakophilin-4.
    
 0.669
N300_02816
Catenin delta-2.
    
 0.669
N300_08192
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 0.669
N300_07670
Catenin alpha-2.
    
 0.664
N300_07685
Catenin alpha-3.
    
 0.664
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.