STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07747Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (136 aa)    
Predicted Functional Partners:
N300_03254
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
N300_01918
E3 ubiquitin-protein ligase TRIP12.
   
 0.982
N300_03535
Polyubiquitin.
   
 0.934
N300_06258
Ubiquitin-40S ribosomal protein S27a.
   
 0.924
N300_06936
Baculoviral IAP repeat-containing protein 6.
   
0.924
N300_09947
Ubiquitin-like modifier-activating enzyme 1.
   
 0.919
N300_07790
Ubiquitin-60S ribosomal protein L40.
   
 0.919
N300_13195
Fanconi anemia group M protein.
    
 0.917
N300_14008
STIP1 homology and U box-containing protein 1.
    
 0.902
N300_11574
RING-box protein 1.
   
 0.879
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.